PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PRY

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	12	AASGFTFSTYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	90.0	H2	10	H2-10-2	11	VLSYDGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H3	14	H3-14-*	-1	AKGGSYAYYYYMDV	BBBBAAABAABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	7	QASQDISNYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	12	YDASNLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	9	QQYDNlPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssSHYWG	BBBABBAABBABBBB
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	77.8	H2	9	H2-9-*	-1	SIYYSESAY	BBBABABBB
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARVTEpRWTSCYFDY
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	87.5	H4	8	H4-8-1	13	IDTSKNQF	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	81.8	L1	11	L1-11-*	-1	RTSQSVTSYLA	BBBBBBBBBBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	23	YDASDRAT	BLEBBBBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QLRSNWpPIT	BBBBABbBLB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBEBB
F	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	12	AASGFTFSTYAMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	90.0	H2	10	H2-10-2	12	VLSYDGSNKY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H3	14	H3-14-*	-1	AKGGSYAYYYYMDV	BBBBAAABAABBAB
F	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	7	QASQDISNYLN	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	12	YDASNLET	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	10	QQYDNlPLT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssSHYWG	BBBABBAABBABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	77.8	H2	9	H2-9-*	-1	SIYYSESAY	BBBAAABBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARVTEpRWTSCYFDY
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	87.5	H4	8	H4-8-1	13	IDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	81.8	L1	11	L1-11-*	-1	RTSQSVTSYLA	BBBBBBBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	23	YDASDRAT	BLEBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QLRSNWpPIT	BBBBABbBLB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBEBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022