PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PQZ

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	98.6	Hu_IGHV3-33*03	100.0	H1	13	H1-13-1	16	AASGFTFSSYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	98.6	Hu_IGHV3-33*03	100.0	H2	10	H2-10-2	10	VIWYDGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	98.6	Hu_IGHV3-33*03	100.0	H3	20	H3-20-*	-1	AKGpdiltgYYNYYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	98.6	Hu_IGHV3-33*03	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	11	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L2	8	L2-8-1	9	YGNSNRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L3	13	L3-13-*	-1	QSYDSSLSgfYVV	BBBBAABBBBBBB
B	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	17	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	13	AASGFTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H2	9	H2-9-1	9	VIYSGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDHVRPGMNI	BBBBABAAABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	9	QASQDISNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	5	YDASNLET	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	15	QQYDNlPVT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022