PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PQY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	13	AASGFTVSSNYMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H2	9	H2-9-1	9	VIYSGGSTY	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDHVRPGMNI	BBBBABAAABB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	9	QASQDISNYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	5	YDASNLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	14	QQYDNlPVT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	13	AASGFTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H2	9	H2-9-1	9	VIYSGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDHVRPGMNI	BBBBABAAABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	9	QASQDISNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	6	YDASNLET	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	15	QQYDNlPVT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022