PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PI2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	KGSGFfSFSSYTMQ	BBBLBBLAAABBBB
B	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H2	9	H2-9-1	13	SISSGGGTN	BBBAALBBB
B	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	40.0	H3	19	H3-19-*	-1	AKHGVNGCDWSysvgcVDA
B	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	87.5	H4	8	H4-8-1	6	RDNGQSTL	BBAAALBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	SGGSSSYYG
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	62.5	L2	8	L2-8-1	13	YNNQKRPS	BLLABBBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSRDNSGGI	BBBBAAEBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	12	KSGSTG	BBEABB
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	KGSGFfSFSSYTMQ	BBBLBBLAAABBBB
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H2	9	H2-9-1	13	SISSGGGTN	BBBAALBBB
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	40.0	H3	19	H3-19-*	-1	AKHGVNGCDWSysvgcVDA
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	87.5	H4	8	H4-8-1	6	RDNGQSTL	BBAAALBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	SGGSSSYYG
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	62.5	L2	8	L2-8-1	13	YNNQKRPS	BLLABBBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSRDNSGGI	BBBBAAEBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	12	KSGSTG	BBEABB
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	KGSGFfSFSSYTMQ	BBBLBBLAAABBBB
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H2	9	H2-9-1	14	SISSGGGTN	BBBAALBBB
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	40.0	H3	19	H3-19-*	-1	AKHGVNGCDWSysvgcVDA
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	87.5	H4	8	H4-8-1	6	RDNGQSTL	BBAAALBB
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	SGGSSSYYG
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	62.5	L2	8	L2-8-1	13	YNNQKRPS	BLLABBBB
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSRDNSGGI	BBBBAAEBB
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	12	KSGSTG	BBEABB
K	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H1	14	H1-14-*	-1	KGSGFfSFSSYTMQ	BBBLBBLAAABBBB
K	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	CDRLenMismatch	-1.0	H2	9	H2-9-1	13	SISSGGGTN	BBBAALBBB
K	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	40.0	H3	19	H3-19-*	-1	AKHGVNGCDWSysvgcVDA
K	heavy	Gallus.gallus	Ch_IGHV1-1*01	95.8	Ch_IGHV1-1*01	87.5	H4	8	H4-8-1	6	RDNGQSTL	BBAAALBB
L	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	SGGSSSYYG
L	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	62.5	L2	8	L2-8-1	13	YNNQKRPS	BLLABBBB
L	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSRDNSGGI	BBBBAAEBB
L	lambda	Gallus.gallus	Ch_IGLV1-1*02	92.4	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	13	KSGSTG	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022