PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PGB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
R	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
R	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
R	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
R	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
S	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
U	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
U	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
U	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
U	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
X	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
X	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
X	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
X	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
a	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
a	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
a	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
a	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
b	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
b	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
b	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
b	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
f	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
f	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
f	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
f	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
g	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
g	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
g	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
g	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
i	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
i	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
i	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
i	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
k	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
k	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
k	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
k	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
m	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
m	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
m	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
m	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
n	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
n	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
n	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
n	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
p	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	16	AASGFNFSSSSIH	BBBLBBAAABBBB
p	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	60.0	H2	10	H2-10-1	12	SISSSSGSTS	BBBAAALBBB
p	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	50.0	H3	16	H3-16-*	-1	ARTYGWYYSwwWAFDY
p	heavy	Homo.sapiens	Hu_IGHV3-23*04	94.5	Hu_IGHV3-23*04	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
q	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAAAABB
q	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	17	YSASSLYS	BLLABBBB
q	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	9	L3-9-*	-1	QQGDPRLVT	BBBBAABBB
q	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB

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