PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7P77

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	17	AASGFPVKNFEME	BBBLBBAAABBBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	11	AIQSGGVETY	BBBAALABBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	FVYVGRSY	BBBBEBBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	16	AASGFPVKNFEME	BBBLBBAAABBBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	9	AIQSGGVETY	BBBAALABBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	FVYVGRSY	BBBBEBBB
D	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	17	AASGFPVKNFEME	BBBLBBAAABBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	10	AIQSGGVETY	BBBAALABBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	FVYVGRSY	BBBBEBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
W	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-5	12	AASGSISSITYLG	BBBEBAAABABBB
W	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	10	ALITVNGHTY	BBBAAALBBB
W	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	0.0	H3	18	H3-18-*	-1	AAAAWGYawplHQDDYWY
W	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	12	LDNAKNTV	BBAAALBB
X	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-5	13	AASGSISSITYLG	BBBEBAAABABBB
X	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	10	ALITVNGHTY	BBBAAALBBB
X	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	0.0	H3	18	H3-18-*	-1	AAAAWGYawplHQDDYWY
X	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	11	LDNAKNTV	BBAAALBB
Y	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-5	13	AASGSISSITYLG	BBBEBAAABABBB
Y	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	10	ALITVNGHTY	BBBAAALBBB
Y	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	0.0	H3	18	H3-18-*	-1	AAAAWGYawplHQDDYWY
Y	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	12	LDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022