PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7P5Y

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	19	AASGFPVMNAGMY	BBBLBBAABBBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGTSTY	BBBBLLLBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDVGDNHFPYDY	BBBLBABBBABABB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	18	RDNAKNTV	BBAAALBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVMNAGMY	BBBLBBAABBBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGTSTY	BBBBLLLBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDVGDNHFPYDY	BBBLBABBBABABB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	15	RDNAKNTV	BBAAALBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	19	AASGFPVMNAGMY	BBBLBBAABBBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGTSTY	BBBBLLLBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDVGDNHFPYDY	BBBLBABBBABABB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	15	RDNAKNTV	BBAAALBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVMNAGMY	BBBLBBAABBBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGTSTY	BBBBLLLBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDVGDNHFPYDY	BBBLBABBBABABB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	15	RDNAKNTV	BBAAALBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	19	AASGFPVMNAGMY	BBBLBBAABBBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGTSTY	BBBBLLLBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDVGDNHFPYDY	BBBLBABBBABABB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	18	RDNAKNTV	BBAAALBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVMNAGMY	BBBLBBAABBBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGTSTY	BBBBLLLBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDVGDNHFPYDY	BBBLBABBBABABB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	15	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022