PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7P5W

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVYQAWMW	BBBABBAABLBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGQYTW	BBBBLLLBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDTGHTTNQYDY	BBABBBABLLBBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVYQAWMW	BBBABBAABLBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGQYTW	BBBBLLLBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDTGHTTNQYDY	BBABBBABLLBBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVYQAWMW	BBBABBAABLBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGQYTW	BBBBLLLBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDTGHTTNQYDY	BBABBBABLLBBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVYQAWMW	BBBABBAABLBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGQYTW	BBBBLLLBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDTGHTTNQYDY	BBABBBABLLBBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVYQAWMW	BBBABBAABLBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGQYTW	BBBBLLLBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDTGHTTNQYDY	BBABBBABLLBBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVYQAWMW	BBBABBAABLBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESEGQYTW	BBBBLLLBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDTGHTTNQYDY	BBABBBABLLBBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022