PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7P5V

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVGRHFMY	BBAABBAAABBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-6	23	AIYSYGEYTE	BBBABLLBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGNEY	BBBBLBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVGRHFMY	BBAABBAAABBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-6	21	AIYSYGEYTE	BBBABLLBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGNEY	BBBBLBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVGRHFMY	BBAABBAAABBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-6	22	AIYSYGEYTE	BBBABLLBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGNEY	BBBBLBBB
I	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVGRHFMY	BBAABBAAABBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-6	21	AIYSYGEYTE	BBBABLLBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGNEY	BBBBLBBB
J	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVGRHFMY	BBAABBAAABBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-6	21	AIYSYGEYTE	BBBABLLBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGNEY	BBBBLBBB
K	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-*	-1	AASGFPVGRHFMY	BBAABBAAABBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-6	21	AIYSYGEYTE	BBBABLLBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGNEY	BBBBLBBB
L	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022