PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7OO2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H1	13	H1-13-1	9	TVSGFSLSRYSVH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H2	9	H2-9-1	13	MIWGGGSTD	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H3	9	H3-9-*	-1	ARNYRGFAY	BBBBLEBAB
A	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	90.9	L1	11	L1-11-1	7	ITSTDIDDDMT	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	75.0	L2	8	L2-8-1	7	SEATTLRP	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	100.0	L3	9	L3-9-cis7-1	7	LQSDNMPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	100.0	L4	6	L4-6-1	20	GYGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H1	13	H1-13-1	9	TVSGFSLSRYSVH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H2	9	H2-9-1	12	MIWGGGSTD	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H3	9	H3-9-*	-1	ARNYRGFAY	BBBBLEBAB
C	heavy	Mus.musculus	Mo_IGHV2-6-4*01	100.0	Mo_IGHV2-6-4*01	100.0	H4	8	H4-8-1	8	KDNSKSQV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	90.9	L1	11	L1-11-1	7	ITSTDIDDDMT	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	75.0	L2	8	L2-8-1	7	SEATTLRP	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	100.0	L3	9	L3-9-cis7-1	7	LQSDNMPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV17-127*01	98.5	Mo_IGKV17-127*01	100.0	L4	6	L4-6-1	20	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022