PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7OMM

#CDRs = 4; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Methanosarcina.mazei	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	13	AASGFPVKYEHMY	BBBLBBAAABBBB
C	heavy	Methanosarcina.mazei	La_IGHV1S3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-2	9	AINSAGNETH	BBBAALABBB
C	heavy	Methanosarcina.mazei	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	50.0	H3	13	H3-13-*	-1	NVKDIGWWAAYDY	BBBLABAALABBB
C	heavy	Methanosarcina.mazei	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	27	RDNAKNTV	BBBAALBB
D	heavy	Methanosarcina.mazei	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	AASGSISSITYLG	BBBEBBAAABBBB
D	heavy	Methanosarcina.mazei	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-*	-1	ALATYYGHTY	BBBBEALBBA
D	heavy	Methanosarcina.mazei	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	0.0	H3	19	H3-19-*	-1	AAAYSGiwtplGVWATYEY
D	heavy	Methanosarcina.mazei	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	LDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022