PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7NX2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L1	15	L1-15-1	13	RASESVDNYgisfMN	BBABBABBLLBBABB
A	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L2	8	L2-8-1	7	YAASNQGS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L3	9	L3-9-cis7-1	10	QQSKEVPWT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	92.3	H1	13	H1-13-1	6	KASGYAFSSYWVN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H2	10	H2-10-1	8	QIYPGDGDTN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H3	14	H3-14-*	-1	ARSRGYFYGSTYDS	BBBBBAAALLBBAB
B	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H4	8	H4-8-1	5	ADKSSSTA	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L1	15	L1-15-1	12	RASESVDNYgisfMN	BBABBABBLLBBABB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L2	8	L2-8-1	7	YAASNQGS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L3	9	L3-9-cis7-1	10	QQSKEVPWT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	100.0	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	92.3	H1	13	H1-13-1	7	KASGYAFSSYWVN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H2	10	H2-10-1	8	QIYPGDGDTN	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H3	14	H3-14-*	-1	ARSRGYFYGSTYDS	BBBBBAAALLBBAB
D	heavy	Mus.musculus	Mo_IGHV1-80*01	100.0	Mo_IGHV1-80*01	100.0	H4	8	H4-8-1	5	ADKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022