PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7NQA

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	30.8	H1	13	H1-13-*	-1	VATGTFRSMEDVG	BBBEABABBBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	33.3	H2	9	H2-9-1	10	EITTLGKVT	BBBAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	50.0	H3	17	H3-17-*	-1	NIEADQTKgigYVVYPY
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	75.0	H4	8	H4-8-1	13	RDDAKNAV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	30.8	H1	13	H1-13-*	-1	VATGTFRSMEDVG	BBBEABABBBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	33.3	H2	9	H2-9-1	8	EITTLGKVT	BBBAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	50.0	H3	17	H3-17-*	-1	NIEADQTKgigYVVYPY
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	89.0	Al_IGHV3S53*01_VHH	75.0	H4	8	H4-8-1	12	RDDAKNAV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022