PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7NOW

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-5	12	AASGRTFSTYAMG	BBBEBAAABABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-2	10	ACSWSGGITR	BBBAALABBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	50.0	H3	21	H3-21-*	-1	ASAASsaaysgaYYYTSYYDY
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-*	-1	AASGRTFSTYAMG	BBBEABBBBABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-*	-1	ACSWSGGITR	BBBAABABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	50.0	H3	21	H3-21-*	-1	ASAASsaaysgaYYYTSYYDY
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022