PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7NKS

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	85.7	H1	14	H1-14-*	-1	TASGFSFSStHWIC	BBBLBBAEAABBBB
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	45.5	H2	11	H2-11-*	-1	CIYVGNTyDSY	BBALBABBBBB
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	100.0	H3	12	H3-12-*	-1	ARSGSVFGVVSL	BBBABAABBBAB
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	100.0	H4	7	H4-7-1	16	KTSSTTV	BABAABB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	85.7	H1	14	H1-14-*	-1	TASGFSFSStHWIC	BBBLBBAEAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	45.5	H2	11	H2-11-*	-1	CIYVGNTyDSY	BBALBABBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	100.0	H3	12	H3-12-*	-1	ARSGSVFGVVSL	BBBABBLBBBAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	100.0	H4	7	H4-7-1	16	KTSSTTV	BABAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022