PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7NFT

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	76.9	H1	13	H1-13-*	-1	AASGRTFSMYAMA	BBBBABAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	40.0	H2	10	H2-10-2	13	TISRSGDYAL	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	50.0	H3	15	H3-15-*	-1	AAGAYHSKdKTLYDY
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	75.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	76.9	H1	13	H1-13-*	-1	AASGRTFSMYAMA	BBBBABAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	40.0	H2	10	H2-10-2	13	TISRSGDYAL	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	50.0	H3	15	H3-15-*	-1	AAGAYHSKdKTLYDY
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	82.2	Hu_IGHV3-23*04	75.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022