PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7NEH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	76.9	H1	13	H1-13-1	11	AASGLTVNRNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	9	VIYSGGSTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDFYEGSFDI	BBBABLLBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	94.5	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	5	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	6	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L3	10	L3-10-cis78-*	-1	QQLNSYpaPV	BBBLBBaBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022