PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7ND8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	95.9	Hu_IGHV3-11*01	92.3	H1	13	H1-13-1	8	AASGFTFSDYYMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	95.9	Hu_IGHV3-11*01	80.0	H2	10	H2-10-2	11	YIRSSGHTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	95.9	Hu_IGHV3-11*01	100.0	H3	18	H3-18-*	-1	ARGGVLRflewPLNAFDI
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	95.9	Hu_IGHV3-11*01	100.0	H4	8	H4-8-1	7	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	98.6	Hu_IGKV1-27*01	100.0	L1	11	L1-11-1	5	RASQGISNYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	98.6	Hu_IGKV1-27*01	100.0	L2	8	L2-8-1	5	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	98.6	Hu_IGKV1-27*01	71.4	L3	9	L3-9-2	24	QKYNNALGT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	98.6	Hu_IGKV1-27*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022