PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7N8Q

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	76.9	H1	13	H1-13-1	15	KASGYTFTSYDIN	BBBLBBAAABBBB
C	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	40.0	H2	10	H2-10-*	-1	WMNPKTGNTG	BBBAABBBBB
C	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	0.0	H3	16	H3-16-*	-1	ATYRIiaAVGYRYFQY
C	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	75.0	H4	8	H4-8-1	18	RDTSTSTA	BBAAALBB
D	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	63.6	L1	11	L1-11-2	30	RASQGFGNYLA	BBABBALLBBB
D	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	87.5	L2	8	L2-8-1	13	YAATTLQS	BLLABBBB
D	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	85.7	L3	9	L3-9-cis7-1	32	QKYNSAPFT	BBAABBbBB
D	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	100.0	L4	6	L4-6-1	33	GSGTDF	EBEABB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	76.9	H1	13	H1-13-1	18	KASGYTFTSYDIN	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	40.0	H2	10	H2-10-*	-1	WMNPKTGNTG	BBBAABBBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	0.0	H3	16	H3-16-*	-1	ATYRIiaAVGYRYFQY
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	90.4	Ma_IGHV1-1*01	75.0	H4	8	H4-8-1	14	RDTSTSTA	BBAAALBB
L	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	63.6	L1	11	L1-11-*	-1	RASQGFGNYLA	BBABBALLBBB
L	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	87.5	L2	8	L2-8-1	14	YAATTLQS	BLEABBBB
L	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	85.7	L3	9	L3-9-cis7-1	22	QKYNSAPFT	BBAABBbBB
L	kappa	Macaca.mulatta	Ma_IGKV1S8*01	95.6	Ma_IGKV1S8*01	100.0	L4	6	L4-6-1	30	GSGTDF	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022