PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7N6P

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	84.6	H1	13	H1-13-*	-1	KVSGGTFSSYTIS	BBBEEBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	18	GIIPSFGVGH	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	50.0	H3	17	H3-17-*	-1	AILGTfnwKSGGNYFGP
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	13	ADKSTTTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	76.5	L1	17	L1-17-1	9	KSSHSVlyssnnKDFFA	BBABBABBAAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	87.5	L2	8	L2-8-1	4	SWASTRES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	71.4	L3	9	L3-9-cis7-1	6	QQYFSSPIT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	83.3	L4	6	L4-6-1	7	GSGTHF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	84.6	H1	13	H1-13-*	-1	KVSGGTFSSYTIS	BBBLLBAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	60.0	H2	10	H2-10-1	16	GIIPSFGVGH	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	50.0	H3	17	H3-17-*	-1	AILGTfnwKSGGNYFGP
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	86.3	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	12	ADKSTTTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	76.5	L1	17	L1-17-1	6	KSSHSVlyssnnKDFFA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	87.5	L2	8	L2-8-1	6	SWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	71.4	L3	9	L3-9-cis7-1	6	QQYFSSPIT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	89.9	Hu_IGKV4-1*01	83.3	L4	6	L4-6-1	8	GSGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022