PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7N5H

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	86.7	H1	15	H1-15-*	-1	TVSGGSVssSNYYWS	BBBLBBABAEABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	77.8	H2	9	H2-9-*	-1	YMYYSGSTK	BBBBLLBBB
E	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	100.0	H3	20	H3-20-*	-1	AREVYYYdrsgyyASDGFDI
E	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBAALABB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-*	-1	YGASSRAT	BLEBBAEA
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	14	QQYGSSPQT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	86.7	H1	15	H1-15-*	-1	TVSGGSVssSNYYWS	BBBLBBABAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	77.8	H2	9	H2-9-*	-1	YMYYSGSTK	BBBBLLBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	100.0	H3	20	H3-20-*	-1	AREVYYYdrsgyyASDGFDI
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	86.7	H1	15	H1-15-*	-1	TVSGGSVssSNYYWS	BBBLBBABAEABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	77.8	H2	9	H2-9-*	-1	YMYYSGSTK	BBBBLLBBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	100.0	H3	20	H3-20-*	-1	AREVYYYdrsgyyASDGFDI
J	heavy	Homo.sapiens	Hu_IGHV4-61*08	100.0	Hu_IGHV4-61*08	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBAALABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-*	-1	YGASSRAT	BLEBBAEA
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	14	QQYGSSPQT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBAALABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-*	-1	YGASSRAT	BLEBBAEA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	14	QQYGSSPQT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022