PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7N3D

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H1	13	H1-13-4	15	TVSGGSISSYYWS	BBBLEBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	66.7	H2	9	H2-9-1	12	YVYYSGNTK	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H3	16	H3-16-*	-1	ARHSRIEVagTLDFDY
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	98.6	Hu_IGHV4-59*01	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSIRSYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	6	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	9	QQSYSTPPT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022