PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7N0U

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV4-59*03	93.2	Hu_IGHV4-59*03	61.5	H1	13	H1-13-1	19	SVSGGSITNYFWT	BBBLEBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV4-59*03	93.2	Hu_IGHV4-59*03	88.9	H2	9	H2-9-1	14	YIYYSGGTN	BBBAALBBB
H	heavy	Mus.musculus	Hu_IGHV4-59*03	93.2	Hu_IGHV4-59*03	100.0	H3	10	H3-10-*	-1	AGSYYYGVDV	BBBBAAEBAB
H	heavy	Mus.musculus	Hu_IGHV4-59*03	93.2	Hu_IGHV4-59*03	87.5	H4	8	H4-8-1	10	IDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	72.7	L1	11	L1-11-*	-1	RASQSIKSFLA	BBABBBAABBB
L	kappa	Mus.musculus	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	17	YDASNRPT	BLLABBBB
L	kappa	Mus.musculus	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	85.7	L3	9	L3-9-cis7-1	7	QQRNNWPFT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022