PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MXP

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	28	AASGFTFSSYGMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	30	VIWYDGSNKF	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H3	12	H3-12-*	-1	ARADYGDFFFDY	BBBALALLBBAB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	25	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	20	AASGFTFSSYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	21	VIWYDGSNKF	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H3	12	H3-12-*	-1	ARADYGDFFFDY	BBBALALLBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	17	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYGMH	BBBEBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	24	VIWYDGSNKF	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H3	12	H3-12-*	-1	ARADYGDFFFDY	BBBALALLBBAB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	98.6	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	21	RDNSKNTL	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	23	SGDALSKHYGY	BEAAAAABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	87.5	L2	8	L2-8-1	20	FKDSERPS	BLLABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	88.9	L3	11	L3-11-*	-1	QSADSSATYWV	BBBBAAALBBB
J	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	83.3	L4	6	L4-6-*	-1	SSGTTI	LBEABB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	72.7	L1	11	L1-11-*	-1	SGDALSKHYGY	BEAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	87.5	L2	8	L2-8-1	20	FKDSERPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	88.9	L3	11	L3-11-*	-1	QSADSSATYWV	BBBBAAALBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	83.3	L4	6	L4-6-*	-1	SSGTTI	LBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	72.7	L1	11	L1-11-4	19	SGDALSKHYGY	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	87.5	L2	8	L2-8-1	23	FKDSERPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	88.9	L3	11	L3-11-*	-1	QSADSSATYWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	97.0	Hu_IGLV3-25*02	83.3	L4	6	L4-6-*	-1	SSGTTI	LBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022