PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MWX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	13	TASGFNIKDTYIH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	10	RIDPANGHTQ	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	50.0	H3	11	H3-11-1	19	ATSDYSYALDS	BBBBAALBBAB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	9	ADTSSNTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	94.1	L1	17	L1-17-1	6	KSSQSLlnsnnqKNYLA	BBABBABBAAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	12	YFASTRES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L3	9	L3-9-cis7-1	17	QQHYSTPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	12	TASGFNIKDTYIH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	10	RIDPANGHTQ	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	50.0	H3	11	H3-11-1	19	ATSDYSYALDS	BBBBAALBBAB
E	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	9	ADTSSNTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	94.1	L1	17	L1-17-1	6	KSSQSLlnsnnqKNYLA	BBABBABBAAALBBBBB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	12	YFASTRES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L3	9	L3-9-cis7-1	17	QQHYSTPYT	BBBABBbBB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022