PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MTA

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	53.8	H1	13	H1-13-1	10	AASGFNLYSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	50.0	H2	10	H2-10-*	-1	SIYSYYGSTS	BBBAAEBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARYEGWwwANTYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	10	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	53.8	H1	13	H1-13-1	13	AASGFNLYSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	50.0	H2	10	H2-10-2	7	SIYSYYGSTS	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARYEGWwwANTYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	18	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	53.8	H1	13	H1-13-1	10	AASGFNLYSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	50.0	H2	10	H2-10-*	-1	SIYSYYGSTS	BBBAAELBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARYEGWwwANTYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	20	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	53.8	H1	13	H1-13-1	9	AASGFNLYSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	50.0	H2	10	H2-10-*	-1	SIYSYYGSTS	BBBAAEBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARYEGWwwANTYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	14	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	53.8	H1	13	H1-13-1	9	AASGFNLYSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	50.0	H2	10	H2-10-*	-1	SIYSYYGSTS	BBBAAELBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARYEGWwwANTYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	17	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	53.8	H1	13	H1-13-1	10	AASGFNLYSSSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ca_IGHV1S29*01	50.0	H2	10	H2-10-*	-1	SIYSYYGSTS	BBBAAELBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARYEGWwwANTYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	10	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAEBLBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BEALBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	11	L3-11-*	-1	QQYYEWlsLFT	BBBEBABBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	21	RSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAEBABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-1	11	YSASSLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	11	L3-11-*	-1	QQYYEWlsLFT	BBBEBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	22	RSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAEBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BEALBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	11	L3-11-*	-1	QQYYEWlsLFT	BALBBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	19	RSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAEBABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BEALBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	11	L3-11-*	-1	QQYYEWlsLFT	BBBEBABBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	18	RSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAEBLBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BEALBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	11	L3-11-*	-1	QQYYEWlsLFT	BBBEBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	19	RSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	63.6	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBAEBLBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Ca_IGKV1-26*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BEALBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	11	L3-11-*	-1	QQYYEWlsLFT	BBBEBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	22	RSGTDF	EBEABB

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