PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MSQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	84.6	H1	13	H1-13-1	12	TVSGGSISSYHWN	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	16	YIYYSGNTN	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	50.0	H3	21	H3-21-*	-1	VREMRRGYSgydywdlYAFDI
D	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	87.5	H4	8	H4-8-1	11	TDTSKNQF	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	6	RASQGISSYLA	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	9	YAASTLQS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-1	10	QQLNSYPHT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	5	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	84.6	H1	13	H1-13-1	13	TVSGGSISSYHWN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	14	YIYYSGNTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	50.0	H3	21	H3-21-*	-1	VREMRRGYSgydywdlYAFDI
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	97.3	Hu_IGHV4-59*01	87.5	H4	8	H4-8-1	11	TDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	5	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	6	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-1	9	QQLNSYPHT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	6	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022