PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MMO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	93.3	H1	15	H1-15-1	14	TFSGFSLSisGVGVG	BBBLBBAABBLBBBB
A	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	100.0	H2	9	H2-9-1	10	LIYWDDDKR	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	66.7	H3	11	H3-11-*	-1	AHHSISTIFDH	BBBBAAAEBBL
A	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	100.0	H4	8	H4-8-1	11	KDTSKNQV	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	85.7	L1	14	L1-14-*	-1	TATSSDVGdYNYVS	BBABAAAEALABBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	75.0	L2	8	L2-8-1	9	FEVSDRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	66.7	L3	9	L3-9-3	21	SSYTTSSAV	BBBBAABBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	93.3	H1	15	H1-15-1	14	TFSGFSLSisGVGVG	BBBLBBAABBLBBBB
D	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	100.0	H2	9	H2-9-1	10	LIYWDDDKR	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	66.7	H3	11	H3-11-*	-1	AHHSISTIFDH	BBBBAAAEBBL
D	heavy	Homo.sapiens	Hu_IGHV2-5*02	94.5	Hu_IGHV2-5*02	100.0	H4	8	H4-8-1	11	KDTSKNQV	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	85.7	L1	14	L1-14-*	-1	TATSSDVGdYNYVS	BBABAAAEALABBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	75.0	L2	8	L2-8-1	9	FEVSDRPS	BLEABBBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	66.7	L3	9	L3-9-3	21	SSYTTSSAV	BBBBAABBB
E	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022