PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MLV

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	61.5	H1	13	H1-13-1	24	KATGHTISRYWID	BBBLBBAAABBBB
F	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	100.0	H2	10	H2-10-1	14	EILPGSGSTN	BBBAAALBBB
F	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	50.0	H3	11	H3-11-*	-1	AMGVRGNYFDY	BBBAAEABBAB
F	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	75.0	H4	8	H4-8-1	20	AEKSSNTA	BBAAALBB
G	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	61.5	H1	13	H1-13-*	-1	KATGHTISRYWID	BBBLBBAAABBBB
G	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	100.0	H2	10	H2-10-1	22	EILPGSGSTN	BBBAAALBBB
G	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	50.0	H3	11	H3-11-*	-1	AMGVRGNYFDY	BBBAAEABBAB
G	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	75.0	H4	8	H4-8-1	17	AEKSSNTA	BBAAALBB
H	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	61.5	H1	13	H1-13-1	24	KATGHTISRYWID	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	100.0	H2	10	H2-10-1	13	EILPGSGSTN	BBBAAALBBB
H	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	50.0	H3	11	H3-11-*	-1	AMGVRGNYFDY	BBBAABABBAB
H	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	75.0	H4	8	H4-8-1	22	AEKSSNTA	BBAAALBB
I	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L1	11	L1-11-*	-1	KASQDVSTAVA	BBABBABBBBB
I	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L2	8	L2-8-1	15	YWASTRHT	BLLABBBB
I	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L3	9	L3-9-*	-1	QQHYSTPRT	BBAABABBB
I	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L4	6	L4-6-1	20	GSGTDY	EBEABB
J	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L1	11	L1-11-*	-1	KASQDVSTAVA	BBABBABABBB
J	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L2	8	L2-8-1	19	YWASTRHT	BLLABBBB
J	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L3	9	L3-9-2	28	QQHYSTPRT	BBAABABBB
J	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L4	6	L4-6-*	-1	GSGTDY	EBEABB
K	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L1	11	L1-11-*	-1	KASQDVSTAVA	BBABBAAAABB
K	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L2	8	L2-8-*	-1	YWASTRHT	BLLABBBB
K	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L3	9	L3-9-2	23	QQHYSTPRT	BBAABABBB
K	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L4	6	L4-6-1	13	GSGTDY	EBEABB
L	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	61.5	H1	13	H1-13-1	25	KATGHTISRYWID	BBBLBBAAABBBB
L	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	100.0	H2	10	H2-10-1	19	EILPGSGSTN	BBBAAALBBB
L	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	50.0	H3	11	H3-11-*	-1	AMGVRGNYFDY	BBBAAEABBAB
L	heavy	Rattus.norvegicus	Mo_IGHV1-9*01	90.4	Mo_IGHV1-9*01	75.0	H4	8	H4-8-1	17	AEKSSNTA	BBAAALBB
M	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L1	11	L1-11-*	-1	KASQDVSTAVA	BBABBABABBB
M	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L2	8	L2-8-1	23	YWASTRHT	BLLABBBB
M	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L3	9	L3-9-2	21	QQHYSTPRT	BBAABABBB
M	kappa	Rattus.norvegicus	Mo_IGKV6-25*01	97.1	Mo_IGKV6-25*01	100.0	L4	6	L4-6-1	21	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022