PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MKL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	92.3	H1	13	H1-13-1	19	TVSGFSLTRYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	77.8	H2	9	H2-9-*	-1	VIWADGSTY	BBBABLBBB
H	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	100.0	H3	10	H3-10-*	-1	ARDGRGYDDY	BBBBAELABB
H	heavy	Mus.musculus	Mo_IGHV2-9*02	97.3	Mo_IGHV2-9*02	100.0	H4	8	H4-8-*	-1	KDNSKSQV	BBBALABB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	70.0	L1	10	L1-10-1	12	SASSTVSFIY	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	87.5	L2	8	L2-8-*	-1	YDTSNPAS	BBLLBBBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	62.5	L3	9	L3-9-cis7-1	20	QQWNTYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	83.3	L4	6	L4-6-*	-1	GCGTSY	BBBLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022