PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MJH

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	84.6	H1	13	H1-13-1	21	AASGFTFDDYAMS	BBBLBBAAABBBB
D	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	CDRLenMismatch	-1.0	H2	9	H2-9-1	10	RMYNNGRTS	BBBAALBBB
D	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	50.0	H3	18	H3-18-*	-1	ARDNLgyrpSENLYGMDV
D	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
E	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	84.6	H1	13	H1-13-1	21	AASGFTFDDYAMS	BBBLBBAAABBBB
E	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	CDRLenMismatch	-1.0	H2	9	H2-9-1	10	RMYNNGRTS	BBBAALBBB
E	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	50.0	H3	18	H3-18-*	-1	ARDNLgyrpSENLYGMDV
E	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
F	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	84.6	H1	13	H1-13-1	21	AASGFTFDDYAMS	BBBLBBAAABBBB
F	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	CDRLenMismatch	-1.0	H2	9	H2-9-1	10	RMYNNGRTS	BBBAALBBB
F	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	50.0	H3	18	H3-18-*	-1	ARDNLgyrpSENLYGMDV
F	heavy	Synthetic.construct	Hu_IGHV3-23*04	87.7	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022