PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MHY

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
M	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	84.6	H1	13	H1-13-*	-1	KASGYTFTNYWLH	BBBLBABABBBBB
M	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	50.0	H2	10	H2-10-1	20	YISPNTGSTE	BBBAAALBBB
M	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	50.0	H3	12	H3-12-*	-1	AGSRITGTWFAY	BBBBAALABBAB
M	heavy	Mus.musculus	Mo_IGHV1-7*01	91.8	Mo_IGHV1-7*01	100.0	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L1	16	L1-16-*	-1	RSSQSIvhsngNTYLE
N	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	11	YWVSNRFS	BLEABBBB
N	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-*	-1	FQGSHVPWT	BBBAABBBB
N	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-3	30	GSGTDF	EAAABB
O	heavy	Mus.musculus	Mo_IGHV9-1*02	97.3	Mo_IGHV9-1*02	100.0	H1	13	H1-13-1	12	KASGYTFTNYGMN	BBBLBBAAABBBB
O	heavy	Mus.musculus	Mo_IGHV9-1*02	97.3	Mo_IGHV9-1*02	100.0	H2	10	H2-10-1	15	WINTYTGEPT	BBBAAALBBB
O	heavy	Mus.musculus	Mo_IGHV9-1*02	97.3	Mo_IGHV9-1*02	100.0	H3	12	H3-12-*	-1	ARVWNYDYYFDY	BBBBABLBABAB
O	heavy	Mus.musculus	Mo_IGHV9-1*02	97.3	Mo_IGHV9-1*02	100.0	H4	8	H4-8-*	-1	LETsastA
P	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	10	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
P	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	87.5	L2	8	L2-8-*	-1	YRVSNRFS
P	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	12	FQGSHVPWT	BBAABBbBB
P	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-2	29	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022