PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MFU

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	9	AASGFPVQAREME	BBBLBBAAABBBB
B	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIKSTGTYTA	BBBABEBABB
B	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGSSY	BBBBLBBB
B	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	6	RDNAKNTV	BBAAALBB
C	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-5	10	AASGSISSITYLG	BBBEBAAABABBB
C	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	9	ALITVNGHTY	BBBAAALBBB
C	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	0.0	H3	18	H3-18-*	-1	AAAAWGYawplHQDDYWY
C	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	10	LDNAKNTV	BBAAALBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	9	AASGFPVQAREME	BBBLBBAAABBBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIKSTGTYTA	BBBABEBABB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	YVYVGSSY	BBBBLBBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	97.3	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
F	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-5	9	AASGSISSITYLG	BBBEBAAABABBB
F	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	10	ALITVNGHTY	BBBAAALBBB
F	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	0.0	H3	18	H3-18-*	-1	AAAAWGYawplHQDDYWY
F	heavy	Synthetic.construct	Ca_IGHV1S45*01_VHH	95.9	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-1	9	LDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022