PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MF9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	14	SASGFDFDNAWMT	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	14	RITGpgEGWSVD	BBBBAAALLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyapgEEYFQD
C	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	5	RDNTKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	9	RGDSLRSHYAS	BBAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	27	YGKNNRPS	BEABBBBB
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
D	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	9	ASGNRA	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	12	SASGFDFDNAWMT	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	13	RITGpgEGWSVD	BBBBAAALLBBB
G	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyapgEEYFQD
G	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	7	RDNTKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	14	SASGFDFDNAWMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	10	RITGpgEGWSVD	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyapgEEYFQD
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	6	RDNTKNTL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	11	RGDSLRSHYAS	BBAAAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	15	YGKNNRPS	BEAABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
I	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	10	ASGNRA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	13	RGDSLRSHYAS	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	14	YGKNNRPS	BEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	11	ASGNRA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	13	SASGFDFDNAWMT	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	12	RITGpgEGWSVD	BBBBAAALLBBB
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyapgEEYFQD
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	7	RDNTKNTL	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	10	RGDSLRSHYAS	BBAAAAABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	14	YGKNNRPS	BEAABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	9	ASGNRA	BBEABB
Q	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	14	SASGFDFDNAWMT	BBBLBBAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	11	RITGpgEGWSVD	BBBBAAALLBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyapgEEYFQD
Q	heavy	Homo.sapiens	Hu_IGHV3-15*07	82.2	Hu_IGHV3-15*07	75.0	H4	8	H4-8-1	6	RDNTKNTL	BBAAALBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	12	RGDSLRSHYAS	BBAAAAABBBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	14	YGKNNRPS	BEAABBBB
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
R	lambda	Homo.sapiens	Hu_IGLV3-19*01	89.6	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	10	ASGNRA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022