PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7MEM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	7	AASGFTFSSFAMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	9	MISAGGGNTY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKSDSSGfQYGRREF
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	9	RDNSKSTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	7	AASGFTFSSFAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	9	MISAGGGNTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKSDSSGfQYGRREF
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	9	RDNSKSTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	92.3	H1	13	H1-13-1	7	AASGFTFSSFAMS	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	9	MISAGGGNTY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKSDSSGfQYGRREF
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	93.1	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	9	RDNSKSTL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	72.7	L1	11	L1-11-1	12	QASQDIRIHLN	BBABBAEABBB
J	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	6	YDASNLEA	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	14	QHYHNlPRT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	72.7	L1	11	L1-11-1	12	QASQDIRIHLN	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	6	YDASNLEA	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	14	QHYHNlPRT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	72.7	L1	11	L1-11-1	12	QASQDIRIHLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	6	YDASNLEA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	14	QHYHNlPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022