PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7M7J

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	15	TASGFTFGDYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H2	12	H2-12-*	-1	FIRSKayGGTTE	BBBBAAAEEBBB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H3	9	H3-9-*	-1	TRGGTLFDY	BBEAABBAB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	19	RDDSKSIA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	18	RSSQSLlhsngYNYLD	BBABBABBAALBBABB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	17	YLGSNRAS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	85.7	L3	10	L3-10-*	-1	MQSLQTPrLT	BBAABBbAAB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-3	24	GSGTDF	EBAABB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	15	TASGFTFGDYAMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H2	12	H2-12-*	-1	FIRSKayGGTTE	BBBBAAAEEBBB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H3	9	H3-9-*	-1	TRGGTLFDY	BBEAABBAB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	19	RDDSKSIA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	18	RSSQSLlhsngYNYLD	BBABBABBAALBBABB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	17	YLGSNRAS	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	85.7	L3	10	L3-10-*	-1	MQSLQTPrLT	BBAABBbAEB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-3	24	GSGTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022