PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7M7G

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	26	TASGFTFGDYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H2	12	H2-12-1	23	FIRSKayGGTTE	BBBBAAALLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H3	9	H3-9-*	-1	TRGGTLFDY	BBEAABBAA
C	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	12	RDDSKSIA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	19	RSSQSLlhsngYNYLD	BBABBABBAALBBABB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	10	YLGSNRAS	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	85.7	L3	10	L3-10-*	-1	MQSLQTPrLT	BBAABBbBAB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-3	19	GSGTDF	EBAABB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H1	13	H1-13-1	20	TASGFTFGDYAMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H2	12	H2-12-*	-1	FIRSKayGGTTE	BBBBAAAEEBBB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H3	9	H3-9-*	-1	TRGGTLFDY	BBEAABBAB
E	heavy	Homo.sapiens	Hu_IGHV3-49*04	98.6	Hu_IGHV3-49*04	100.0	H4	8	H4-8-1	12	RDDSKSIA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	20	RSSQSLlhsngYNYLD	BBABBABBAALBBABB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	16	YLGSNRAS	BLEABBBB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	85.7	L3	10	L3-10-*	-1	MQSLQTPrLT	BBAABBbBAB
F	kappa	Homo.sapiens	Hu_IGKV2-28*01	98.6	Hu_IGKV2-28*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022