PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LYW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	7	KASGYTFTNYAIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	90.0	H2	10	H2-10-1	15	WINAGRGNTK	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H3	15	H3-15-*	-1	ARDESTgDYYYYMDV
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	8	RDTSASTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	7	SGDRLDDKYAS	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	11	YQDNKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	75.0	L3	9	L3-9-1	12	QAWDSDTYV	BBBBLLBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBLLBB
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	7	KASGYTFTNYAIH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	90.0	H2	10	H2-10-1	16	WINAGRGNTK	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H3	15	H3-15-*	-1	ARDESTgDYYYYMDV
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	10	RDTSASTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	7	SGDRLDDKYAS	BBBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	11	YQDNKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	75.0	L3	9	L3-9-1	9	QAWDSDTYV	BBBBLLBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBLLBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	7	KASGYTFTNYAIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	90.0	H2	10	H2-10-1	16	WINAGRGNTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H3	15	H3-15-*	-1	ARDESTgDYYYYMDV
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	8	RDTSASTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	7	SGDRLDDKYAS	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	11	YQDNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	75.0	L3	9	L3-9-1	9	QAWDSDTYV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	98.5	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022