PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LY3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	81.8	L1	11	L1-11-4	13	SGDALAKHYAY	BEAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	100.0	L2	8	L2-8-*	-1	YKDSERPS	BLLABBBA
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	66.7	L3	11	L3-11-2	12	QSADSIGSSWV	BBBBAALABBB
C	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	11	SSGTTV	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	9	VIWYDGSNRY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	100.0	H3	12	H3-12-3	14	ARAVAGEWYFDY	BBBBBLBABBAB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	81.8	L1	11	L1-11-4	13	SGDALAKHYAY	BEAAAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	100.0	L2	8	L2-8-*	-1	YKDSERPS	BLLABBBA
E	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	66.7	L3	11	L3-11-2	12	QSADSIGSSWV	BBBBAALABBB
E	lambda	Homo.sapiens	Hu_IGLV3-25*02	98.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	10	SSGTTV	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	9	VIWYDGSNRY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	100.0	H3	12	H3-12-3	15	ARAVAGEWYFDY	BBBBBLBABBAB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022