PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LXZ

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	5	RASQSVSsSYLA	BBABBBBAAABB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	17	QQYGSSAWT	BBBELLBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	5	RASQSVSsSYLA	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	17	QQYGSSAWT	BBBELLBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPISSGTS	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARAAPFydfwSGYSYFDY
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	SDTSITTA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPISSGTS	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARAAPFydfwSGYSYFDY
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	SDTSITTA	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	7	AASGFTFSDYTIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	7	SISSSSNYIY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H3	19	H3-19-*	-1	ARDGNAYkwllaENVRFDY
G	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	7	AASGFTFSDYTIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	7	SISSSSNYIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H3	19	H3-19-*	-1	ARDGNAYkwllaENVRFDY
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	20	TGTSSDVGgYNYVS	BBBAAAAAABBABB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	75.0	L2	8	L2-8-1	8	YDVSDRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	88.9	L3	12	L3-12-*	-1	SSYTSSStPNWV
I	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	6	KSGNTA	BBEABB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	20	TGTSSDVGgYNYVS	BBBAAAAAABBABB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	75.0	L2	8	L2-8-1	8	YDVSDRPS	BLEABBBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	88.9	L3	12	L3-12-*	-1	SSYTSSStPNWV
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	6	KSGNTA	BBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	5	RASQSVSsSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	17	QQYGSSAWT	BBBELLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPISSGTS	BBBAAALBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARAAPFydfwSGYSYFDY
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	SDTSITTA	BBAAALBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	69.2	H1	13	H1-13-1	7	AASGFTFSDYTIH	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	7	SISSSSNYIY	BBBAALABBB
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H3	19	H3-19-*	-1	ARDGNAYkwllaENVRFDY
N	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	20	TGTSSDVGgYNYVS	BBBAAAAAABBABB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	75.0	L2	8	L2-8-1	8	YDVSDRPS	BLEABBBB
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	88.9	L3	12	L3-12-*	-1	SSYTSSStPNWV
O	lambda	Homo.sapiens	Hu_IGLV2-14*01	98.5	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	6	KSGNTA	BBEABB

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