PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LXY

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	6	RASQSVSsSYLA	BBABBBBAAABB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	16	QQYGSSAWT	BBBELLBBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	6	RASQSVSsSYLA	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	16	QQYGSSAWT	BBBELLBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	8	WINPISSGTS	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARAAPFydfwSGYSYFDY
E	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	SDTSITTA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	8	WINPISSGTS	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARAAPFydfwSGYSYFDY
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	SDTSITTA	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	7	AASGFTFSNYGMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSNKF	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	100.0	H3	17	H3-17-*	-1	ARAFPDSSSWsgfTIDY
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	87.5	H4	8	H4-8-1	4	RDNSKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	7	AASGFTFSNYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSNKF	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	100.0	H3	17	H3-17-*	-1	ARAFPDSSSWsgfTIDY
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	87.5	H4	8	H4-8-1	4	RDNSKNSL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	81.8	L1	11	L1-11-3	11	GGNNIERKSVH	BBBLAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	11	YDDSDRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	77.8	L3	11	L3-11-1	14	QVWDSGSDQVI	BBBBAAALBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	6	RASQSVSsSYLA	BBABBBBAAABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	85.7	L3	9	L3-9-1	16	QQYGSSAWT	BBBELLBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	81.8	L1	11	L1-11-3	11	GGNNIERKSVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	11	YDDSDRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	77.8	L3	11	L3-11-1	14	QVWDSGSDQVI	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	8	KASGYTFTGYYMH	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	8	WINPISSGTS	BBBAAALBBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	100.0	H3	18	H3-18-*	-1	ARAAPFydfwSGYSYFDY
M	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.8	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	SDTSITTA	BBAAALBB
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	92.3	H1	13	H1-13-1	7	AASGFTFSNYGMH	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	8	VIWYDGSNKF	BBBAALABBB
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	100.0	H3	17	H3-17-*	-1	ARAFPDSSSWsgfTIDY
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.2	Hu_IGHV3-33*01	87.5	H4	8	H4-8-1	4	RDNSKNSL	BBAAALBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	81.8	L1	11	L1-11-3	11	GGNNIERKSVH	BBBLAAABBBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	100.0	L2	8	L2-8-1	11	YDDSDRPS	BLEABBBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	77.8	L3	11	L3-11-1	14	QVWDSGSDQVI	BBBBAAALBBB
O	lambda	Homo.sapiens	Hu_IGLV3-21*03	89.2	Hu_IGLV3-21*03	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022