PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LX5

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Vicugna.pacos	Al_IGHV3S9*01	97.3	Al_IGHV3S9*01	76.9	H1	13	H1-13-*	-1	AASGFTFRRYLMG	BBBLBBAABBBBB
A	heavy	Vicugna.pacos	Al_IGHV3S9*01	97.3	Al_IGHV3S9*01	100.0	H2	9	H2-9-1	9	GIYSDGSTY	BBBAALBBB
A	heavy	Vicugna.pacos	Al_IGHV3S9*01	97.3	Al_IGHV3S9*01	0.0	H3	17	H3-17-*	-1	AKDRMDGStwpERDFGS
A	heavy	Vicugna.pacos	Al_IGHV3S9*01	97.3	Al_IGHV3S9*01	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBBLBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-*	-1	AVSGFTLDYYAIG	BBBLBABABBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-2	13	CISSSGGNTK	BBBAALABBB
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	23	H3-23-*	-1	AAIAATYYSgsyyfqcphDGMDY
C	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNTF	BBAABBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022