PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LUD

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	10	KASGYRFSNYGIS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	80.0	H2	10	H2-10-1	10	WISAYNGNIK	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	100.0	H3	14	H3-14-*	-1	ARDVPADGVHFMDV	BBBBABBBBBALAB
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	87.5	H4	8	H4-8-1	6	TDTSTATA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	93.8	L1	16	L1-16-1	14	RSSQSLvhsdtNTYLN	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	100.0	L2	8	L2-8-*	-1	YKVSNRDS	ABLABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	71.4	L3	9	L3-9-2	10	MQGSHWAPT	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	83.3	L4	6	L4-6-1	11	GSGTTF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	76.9	H1	13	H1-13-1	10	KASGYRFSNYGIS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	80.0	H2	10	H2-10-1	10	WISAYNGNIK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	100.0	H3	14	H3-14-*	-1	ARDVPADGVHFMDV	BBBBABBBBBALAB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	89.0	Hu_IGHV1-18*01	87.5	H4	8	H4-8-1	6	TDTSTATA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	93.8	L1	16	L1-16-1	15	RSSQSLvhsdtNTYLN	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	100.0	L2	8	L2-8-1	7	YKVSNRDS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	71.4	L3	9	L3-9-2	10	MQGSHWAPT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*02	97.1	Hu_IGKV2-30*02	83.3	L4	6	L4-6-1	10	GSGTTF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022