PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LUC

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	69.2	H1	13	H1-13-1	15	QASGYTFNNYGVS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	80.0	H2	10	H2-10-1	14	WISAYNGNKK	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	0.0	H3	14	H3-14-*	-1	ARDPPAVAAAMFDF	BBBBABBBBBALAB
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	75.0	H4	8	H4-8-1	15	TVTSTGTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	87.5	L1	16	L1-16-1	15	RSSQSLvlsdgNTYLS	BBABBABBAALBBBBB
E	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	62.5	L2	8	L2-8-*	-1	YRISHRDS	ABBLBBBB
E	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	100.0	L3	9	L3-9-cis7-1	17	MQGTHWPRT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	83.3	L4	6	L4-6-2	28	ESGTDF	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	69.2	H1	13	H1-13-1	15	QASGYTFNNYGVS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	80.0	H2	10	H2-10-1	14	WISAYNGNKK	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	0.0	H3	14	H3-14-*	-1	ARDPPAVAAAMFDF	BBBBABBBBBALAB
F	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	75.0	H4	8	H4-8-1	15	TVTSTGTA	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	87.5	L1	16	L1-16-1	15	RSSQSLvlsdgNTYLS	BBABBABBAALBBBBB
G	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	62.5	L2	8	L2-8-*	-1	YRISHRDS	ABBLBBBB
G	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	100.0	L3	9	L3-9-cis7-1	17	MQGTHWPRT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	83.3	L4	6	L4-6-2	28	ESGTDF	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	69.2	H1	13	H1-13-1	15	QASGYTFNNYGVS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	80.0	H2	10	H2-10-1	14	WISAYNGNKK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	0.0	H3	14	H3-14-*	-1	ARDPPAVAAAMFDF	BBBBABBBBBALAB
H	heavy	Homo.sapiens	Hu_IGHV1-18*02	87.0	Hu_IGHV1-18*02	75.0	H4	8	H4-8-1	15	TVTSTGTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	87.5	L1	16	L1-16-1	15	RSSQSLvlsdgNTYLS	BBABBABBAALBBBBB
I	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	62.5	L2	8	L2-8-*	-1	YRISHRDS	ABBLBBBB
I	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	100.0	L3	9	L3-9-cis7-1	17	MQGTHWPRT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV2-30*02	92.8	Hu_IGKV2-30*02	83.3	L4	6	L4-6-2	28	ESGTDF	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	69.2	H1	13	H1-13-*	-1	KGSADSFTNHWIG	BBBAAAAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	10	MIYPGDSDTR	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	100.0	H3	22	H3-22-*	-1	ARQVGGvvvaepppYYYYGMDA
J	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	50.0	H4	8	H4-8-1	8	VDKSVTTV	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-2	8	RASQSIATFLN	BBABBALLBBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	50.0	L2	8	L2-8-1	13	FDASKLQT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	10	QQsYDLPLT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	11	GSGTHF	EBEABB
L	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	69.2	H1	13	H1-13-*	-1	KGSADSFTNHWIG	BBBAAAAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	10	MIYPGDSDTR	BBBAAALBBB
L	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	100.0	H3	22	H3-22-*	-1	ARQVGGvvvaepppYYYYGMDA
L	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	50.0	H4	8	H4-8-1	8	VDKSVTTV	BBAAALBB
M	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-2	6	RASQSIATFLN	BBABBALLBBB
M	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	50.0	L2	8	L2-8-1	13	FDASKLQT	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	9	QQsYDLPLT	BBAABBbBB
M	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	12	GSGTHF	EBEABB
N	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	69.2	H1	13	H1-13-*	-1	KGSADSFTNHWIG	BBBAAAAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	10	MIYPGDSDTR	BBBAAALBBB
N	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	100.0	H3	22	H3-22-*	-1	ARQVGGvvvaepppYYYYGMDA
N	heavy	Homo.sapiens	Hu_IGHV5-51*01	89.0	Hu_IGHV5-51*01	50.0	H4	8	H4-8-1	8	VDKSVTTV	BBAAALBB
O	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-2	9	RASQSIATFLN	BBABBALLBBB
O	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	50.0	L2	8	L2-8-1	12	FDASKLQT	BLLABBBB
O	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	10	QQsYDLPLT	BBAABBbBB
O	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	11	GSGTHF	EBEABB

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