PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LSI

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	17	AASGFTFSWYVMG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H2	10	H2-10-2	14	SIYPSGGATN	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H3	8	H3-8-*	-1	ARGNYFDY	BBEABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	76.9	H1	13	H1-13-1	16	AASGFTFSWYVMG	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H2	10	H2-10-*	-1	SIYPSGGATN	BBBAALBBeE
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H3	8	H3-8-2	11	ARGNYFDY	BBEAALAB
B	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	16	SGEKLGDEYAS	BBBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	12	YQDNKRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	9	L3-9-*	-1	QAWDSSTLL	BBBEeEBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	23	NSGNTA	BBEABB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	12	SGEKLGDEYAS	BBBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	14	YQDNKRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	9	L3-9-*	-1	QAWDSSTLL	BBBALABBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BAEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022