PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LS9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H1	13	H1-13-1	15	AASGFTFSDHYMD	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H2	12	H2-12-1	13	RTRNKanSYTTE	BBBBAAALLBBB
D	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H3	21	H3-21-*	-1	ARVHRWAYcingvcfGAYSDY
D	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	87.5	H4	8	H4-8-1	12	RDDAKNSL	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H1	13	H1-13-1	17	AASGFTFSDHYMD	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H2	12	H2-12-1	14	RTRNKanSYTTE	BBBBAAALLBBB
E	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H3	21	H3-21-*	-1	ARVHRWAYcingvcfGAYSDY
E	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	87.5	H4	8	H4-8-1	12	RDDAKNSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	12	RASQSVSsSYLA	BBABBBBLLBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	18	YGASSRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	13	QQYGSSPST	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	13	RASQSVSsSYLA	BBABBBBLLBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	17	YGASSRAT	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	13	QQYGSSPST	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H1	13	H1-13-1	17	AASGFTFSDHYMD	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H2	12	H2-12-1	12	RTRNKanSYTTE	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	100.0	H3	21	H3-21-*	-1	ARVHRWAYcingvcfGAYSDY
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	97.3	Hu_IGHV3-72*01	87.5	H4	8	H4-8-1	16	RDDAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	14	RASQSVSsSYLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	18	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	13	QQYGSSPST	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022