PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LRT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H1	13	H1-13-1	22	KASGFTFTSSAVQ	BBBLBBAABBBBB
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H2	10	H2-10-*	-1	WIVVGSGNTN	BBBAAELBBB
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H3	16	H3-16-*	-1	AAPNcsNVVCYDGFDI
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H4	8	H4-8-*	-1	RDMSTSTA	AEAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBBABBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YSASSRAT	BLEBBBBA
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	20	QQYGTSPWT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-3	28	GSGTDF	BBAABB
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H1	13	H1-13-1	25	KASGFTFTSSAVQ	BBBLBBAABBBBB
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H2	10	H2-10-*	-1	WIVVGSGNTN	BBBAAELBBB
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H3	16	H3-16-*	-1	AAPNcsNVVCYDGFDI
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H4	8	H4-8-*	-1	RDMSTSTA	AEAAALBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBBABBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YSASSRAT	BLEBBBBA
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	21	QQYGTSPWT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-3	28	GSGTDF	BBAABB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H1	13	H1-13-1	26	KASGFTFTSSAVQ	BBBLBBAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H2	10	H2-10-*	-1	WIVVGSGNTN	BBBAAELBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H3	16	H3-16-*	-1	AAPNcsNVVCYDGFDI
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	100.0	Hu_IGHV1-58*01	100.0	H4	8	H4-8-*	-1	RDMSTSTA	AEAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBBABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	87.5	L2	8	L2-8-*	-1	YSASSRAT	BLEBBBBA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	85.7	L3	9	L3-9-cis7-1	20	QQYGTSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-3	32	GSGTDF	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022