PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LR4

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	76.9	H1	13	H1-13-1	18	KASDYSLSDYNMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	80.0	H2	10	H2-10-1	7	VINPNHGTTH	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	50.0	H3	14	H3-14-*	-1	ASPIHYGNHVPFDY	BBBAAABAABbBAB
A	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	100.0	H4	8	H4-8-1	9	VDQSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	81.8	L1	11	L1-11-2	6	RTGQDISNYLN	BBABBALLBBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	7	YFTSRLHS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	10	QQGITLPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	10	GSGTDY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	76.9	H1	13	H1-13-*	-1	KASDYSLSDYNMN	BBAABBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	80.0	H2	10	H2-10-1	8	VINPNHGTTH	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	50.0	H3	14	H3-14-*	-1	ASPIHYGNHVPFDY	BBBAAABAABbBAB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	93.1	Mo_IGHV1-39*01	100.0	H4	8	H4-8-1	14	VDQSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	81.8	L1	11	L1-11-2	7	RTGQDISNYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	87.5	L2	8	L2-8-1	5	YFTSRLHS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	85.7	L3	9	L3-9-cis7-1	9	QQGITLPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*02	100.0	Mo_IGKV10-96*02	100.0	L4	6	L4-6-1	5	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022