PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LR3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	92.3	H1	13	H1-13-1	15	AASEFTFSDYGMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	70.0	H2	10	H2-10-2	17	SISSGSNSIY	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	50.0	H3	10	H3-10-*	-1	SREAYFAMDY	BBBBLLBBAB
A	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	75.0	H4	8	H4-8-1	13	RDNAKSIL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	90.9	L1	11	L1-11-2	12	KASQDIHKYIA	BBABBALLBBB
B	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	87.5	L2	8	L2-8-*	-1	YYTSTLQP	BEBLBBBB
B	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	8	LQYDNLYT	BBAABEBB
B	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	14	GSGRDY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	92.3	H1	13	H1-13-1	10	AASEFTFSDYGMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	70.0	H2	10	H2-10-2	14	SISSGSNSIY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	50.0	H3	10	H3-10-*	-1	SREAYFAMDY	BBBBLLBBAB
H	heavy	Mus.musculus	Mo_IGHV5-17*01	95.9	Mo_IGHV5-17*01	75.0	H4	8	H4-8-1	10	RDNAKSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	90.9	L1	11	L1-11-2	8	KASQDIHKYIA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	87.5	L2	8	L2-8-*	-1	YYTSTLQP	BLEBBBBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	7	LQYDNLYT	BBAABEBB
L	kappa	Mus.musculus	Mo_IGKV19-93*01	95.7	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	10	GSGRDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022