PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LQV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	84.6	H1	13	H1-13-*	-1	KASGGTFSSHTIT	BALABBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	100.0	H2	10	H2-10-1	15	RIIPILGIAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	50.0	H3	18	H3-18-*	-1	ASLQTvdtaIEKYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	100.0	H4	8	H4-8-1	14	ADKSTSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L1	11	L1-11-*	-1	SGDKLGDKYAC	BBBLABLALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-*	-1	YQDNKRPS	BLBLBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	9	L3-9-1	16	QAWDSSTAV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBAABB
W	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	84.6	H1	13	H1-13-*	-1	KASGGTFSSHTIT	BALBBBABLBBBB
W	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	100.0	H2	10	H2-10-1	16	RIIPILGIAN	BBBAAALBBB
W	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	50.0	H3	18	H3-18-*	-1	ASLQTvdtaIEKYYGMDV
W	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	100.0	H4	8	H4-8-1	13	ADKSTSTA	BBAAALBB
X	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L1	11	L1-11-*	-1	SGDKLGDKYAC	BBBLABLALBB
X	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-*	-1	YqDNKRPS
X	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	9	L3-9-1	16	QAWDSSTAV	BBBBLLBBB
X	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBAABB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	84.6	H1	13	H1-13-*	-1	KASGGTFSSHTIT	BALBBBABLBBBB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	100.0	H2	10	H2-10-1	16	RIIPILGIAN	BBBAAALBBB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	50.0	H3	18	H3-18-*	-1	ASLQTvdtaIEKYYGMDV
Y	heavy	Homo.sapiens	Hu_IGHV1-69*02	98.6	Hu_IGHV1-69*02	100.0	H4	8	H4-8-1	13	ADKSTSTA	BBAAALBB
Z	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L1	11	L1-11-*	-1	SGDKLGDKYAC	BBBLABLALBB
Z	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-*	-1	YQDNKRPS	BLBLBBBB
Z	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	9	L3-9-1	16	QAWDSSTAV	BBBBLLBBB
Z	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-*	-1	NSGNTA	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022